PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID model.Picochlorum_contig_146.g625.t1
Organism
Picochlorum sp. SENEW3
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Trebouxiophyceae incertae sedis; Picochlorum
Family bZIP
Protein Properties Length: 173aa    MW: 19893.9 Da    PI: 6.5208
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
model.Picochlorum_contig_146.g625.t1genomeRutgersView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.52.5e-1298142347
                                           XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                                bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                                           + +re r+ +NRe Arr RqR+++ i+eLe k ++L ++N+ L +
  model.Picochlorum_contig_146.g625.t1  98 SHRRELRRHSNRECARRIRQRREETIQELESKREQLMKQNEHLLE 142
                                           679**************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.005996160IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.79598140IPR004827Basic-leucine zipper domain
PfamPF001709.7E-1098143IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-8100142No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-8100142No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MQGDIEADGV IRNPPSHRHA GNPDTSEESN KYSLRGKRVK YTDFDDVSDD SEEEKDALKL  60
PEDGNPHDSD AYYSAGEDLM DNGLVAMQGK GTTLSPRSHR RELRRHSNRE CARRIRQRRE  120
ETIQELESKR EQLMKQNEHL LEIACTTLIT WQRIVRETSQ QQQAISMKKR ST*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112119RRIRQRRE