PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID model.Picochlorum_contig_146.g655.t1
Organism
Picochlorum sp. SENEW3
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Trebouxiophyceae incertae sedis; Picochlorum
Family bZIP
Protein Properties Length: 223aa    MW: 24643.3 Da    PI: 4.6705
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
model.Picochlorum_contig_146.g655.t1genomeRutgersView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.82.7e-1475132259
                                           XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                                bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                                           ke++++ ++ +N+eAArrsRq+K+a++ eL e v++L+ eN +L   +e+ + ++ + 
  model.Picochlorum_contig_146.g655.t1  75 KEREKALKRLRNKEAARRSRQKKQARMRELSETVDALQRENVMLMTCIEHFSSKALEA 132
                                           7899****************************************99999988776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-574138IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.6E-1074127No hitNo description
PfamPF001704.4E-1075126IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.04876128IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-879128No hitNo description
CDDcd146861.23E-779123No hitNo description
PROSITE patternPS0003608296IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MEDLAHGEGY GGDEEHNQLE KILTLSREKL VEAEGDIERL QLGMGKKSES AKGEEDGGNS  60
DSLDEKALLE ALPAKEREKA LKRLRNKEAA RRSRQKKQAR MRELSETVDA LQRENVMLMT  120
CIEHFSSKAL EAKKWTEEKE SVGKASPSQR EAEEGIPLLD NLGDLNRGGA PLTGRSSLTN  180
AALDEQLAML SSRDISPRDE DDDLGDNNNQ NPTNQGMKKD DK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18096LKRLRNKEAARRSRQKK
29096RRSRQKK