PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID model.Picochlorum_contig_91.g447.t1
Organism
Picochlorum sp. SENEW3
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Trebouxiophyceae incertae sedis; Picochlorum
Family bZIP
Protein Properties Length: 173aa    MW: 19712.1 Da    PI: 9.534
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
model.Picochlorum_contig_91.g447.t1genomeRutgersView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.95.2e-09100148553
                                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                                           ++ rk++NR AA  s  +++++++ Le++v+ L++eN++L+k l+  +
  model.Picochlorum_contig_91.g447.t1 100 AAAARKERNRQAALNSYYKRRQRTQDLEKEVDHLSKENSMLQKLLQDVQ 148
                                          5788*************************************98887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-1189149No hitNo description
SMARTSM003382.1E-496160IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.32498149IPR004827Basic-leucine zipper domain
CDDcd146861.02E-9101149No hitNo description
SuperFamilySSF579594.94E-8103149No hitNo description
PfamPF077169.8E-7103145IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MGRPLDSVYE QSLQSFPWAD FSIFSESDAK GTCPFMHALP HNRSTPHVYA LSAGSDARNV  60
TNHTAHVPVD VEESNAKKKE TKKRTRGPKP KYIYSSKEQA AAARKERNRQ AALNSYYKRR  120
QRTQDLEKEV DHLSKENSML QKLLQDVQEG RANPLEVCSM EKIDIYLREH GH*