PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

mrna02419.1-v1.0-hybrid

Organism

Fragaria vesca

Taxonomic ID

57918

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

bZIP

Protein Properties

Length: 136aa MW: 15299.8 Da PI: 9.469

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
mrna02419.1-v1.0-hybrid	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.8	4.2e-07	82	112	21	51
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkelee 51 R+ K+a+ eeLe+kv+ L++eN + kkele+ mrna02419.1-v1.0-hybrid 82 RKNKRAYREELERKVEHLKQENARRKKELET 112 999********************99999986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.4E-5	82	111	No hit	No description
CDD	cd14686	1.10E-5	82	111	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence Send to blast
MEETWRQTYL ASLSSSAQAP FANDVPHPHN YSSTAAHDPT TSSNFPHPMM QNYQLFCYNG 60 PLIINPNQGF DNTSTSSSFG TRKNKRAYRE ELERKVEHLK QENARRKKEL ETSIAAASGQ 120 LSITHNHRRS SSALF*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	mrna02419.1-v1.0-hybrid

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011460679.1	3e-90	PREDICTED: protein FD-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF34093	2	2

Link Out ? help Back to Top
Phytozome	mrna02419.1-v1.0-hybrid