PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna13336.1-v1.0-hybrid
Organism
Fragaria vesca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family C2H2
Protein Properties Length: 102aa    MW: 11460.9 Da    PI: 9.106
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna13336.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000127195121
                             EEETTTT....EEESSHHHHHHHHH CS
                  zf-C2H2  1 ykCpdCg....ksFsrksnLkrHir 21
                             ++C+ C     +sF ++++L++H  
  mrna13336.1-v1.0-hybrid 71 FVCGVCEtipkRSFITQHDLTQHKI 95
                             89*********************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MVRPRNNNKN QRSKNQEENQ EKPSAMCKSC NTEARAEDIE AHVKFGCENS MKQASRVATI  60
EISSDGKKKV FVCGVCETIP KRSFITQHDL TQHKIDKHGT Q*
Cis-element ? help Back to Top
SourceLink
PlantRegMapmrna13336.1-v1.0-hybrid
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-