PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g031672m
Common NameCISIN_1g027074mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 156aa    MW: 17807.3 Da    PI: 4.9536
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g031672mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.84.3e-19121175128
                NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                        + F  tde+l    L++ ++g++l++ +vi++v+ y++ P++Lp      +  wy  +++++++         +++g W+a+g++ e++s +
  orange1.1g031672m  12 VDFASTDENLFG-SLERMIRGSPLPC-NVINDVNPYNHRPSNLP------DGVWYLVCSKENTS---------AQHGQWRAKGETCEIFS-N 85 
                        67999*****95.5************.99**************9......45799999987654.........5689*************.9 PP

                NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                        +  +g ++tL f++g+ p+ +ktdWvm+e+r+
  orange1.1g031672m  86 SYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 117
                        99****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.8E-257127IPR003441NAC domain
PROSITE profilePS5100522.7298137IPR003441NAC domain
PfamPF023651.6E-1011117IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MCPPTASTPI DVDFASTDEN LFGSLERMIR GSPLPCNVIN DVNPYNHRPS NLPDGVWYLV  60
CSKENTSAQH GQWRAKGETC EIFSNSYIIG WRTTLEFFEG QVPNERKTDW VMQEFRITQK  120
RLYGDKKEEV FCLPCILMHC YVYFVVISIT PASEV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006473456.15e-94NAC transcription factor 29-like isoform X2
RefseqXP_015384376.15e-94NAC transcription factor 29-like isoform X2
TrEMBLA0A067H9L71e-113A0A067H9L7_CITSI; Uncharacterized protein
STRINGXP_006473456.12e-93(Citrus sinensis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.11e-15NAC domain containing protein 76