PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g041471m
Common NameCISIN_1g041471mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 226aa    MW: 24721.6 Da    PI: 11.4468
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g041471mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.19.2e-09181223547
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                        +r+rr+  NR +A rsR+R +a+  +Le++++ L++eN++L  
  orange1.1g041471m 181 RRARRMTMNRKSAARSRERIRAYNSKLEREIAFLTEENERLSR 223
                        79*************************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.8E-7172224No hitNo description
PfamPF001701.7E-7180223IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.73E-6181224No hitNo description
PROSITE profilePS502179.393181226IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MLSSPSTDDA SDVDTNENNP RKPKKMDDVW RDQSLGLGSS SSTSSGGGDT AAEGPTFNNN  60
KTKLTLRHRS VPRMGVRMQE FLGTFSRESS LRNNPPPKPN GVFTLFGFPI PIYAPASATH  120
TPTQANSSPA TLALASGSTD PLPEEGNSLR AGLPAALGGS NSRAPISRRK RRKPSNDVCA  180
RRARRMTMNR KSAARSRERI RAYNSKLERE IAFLTEENER LSRKQH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A067D6I21e-162A0A067D6I2_CITSI; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.17e-11abscisic acid responsive elements-binding factor 2