PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g041972m
Common NameCISIN_1g041972mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family G2-like
Protein Properties Length: 153aa    MW: 17159.6 Da    PI: 9.165
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g041972mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like231.8e-073873439
            G2-like  4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvk 39
                        +Wtp+ H++Fvea ++ GG ++    ++ e+mk +
  orange1.1g041972m 38 FVWTPNCHRKFVEAAKESGGFDNVSAFSVWEIMKAE 73
                       58*******************************854 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.3E-73372IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MRGDRRINPF HLGNIKLYPR DRRTRRYSPY VRTSKRPFVW TPNCHRKFVE AAKESGGFDN  60
VSAFSVWEIM KAEVDGVSPT LNDASSVLGM LQFMFPEYAV SPPPTVTFYI DVKSEVGSCE  120
AMVSEFGKLK LGPKTESSSC DAMVSEFGKF NI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A067E9471e-109A0A067E947_CITSI; Uncharacterized protein