PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g045005m
Common NameCISIN_1g045005mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 150aa    MW: 17335.9 Da    PI: 9.9653
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g045005mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.23.2e-1267128160
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel..eelkkevaklk 60 
                        e+e k+ + ++kNR +A rsR+RK+++i+ Lee v++L++eN +Lk  +  e+l+  ++k +
  orange1.1g045005m  67 EEEQKKKKILIKNRASAARSRARKLERIKFLEEQVETLKEENAKLKRIIleETLRRRCQKIQ 128
                        678999999*************************************9884456777777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.880.102.8E-65795IPR008917Transcription factor, Skn-1-like, DNA-binding domain
SMARTSM003386.5E-1267133IPR004827Basic-leucine zipper domain
PfamPF001701.2E-967126IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.70369113IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.36E-971113No hitNo description
PROSITE patternPS0003607489IPR004827Basic-leucine zipper domain
PRINTSPR000431.4E-57894IPR002112Transcription factor Jun
PRINTSPR000431.4E-596108IPR002112Transcription factor Jun
Gene3DG3DSA:1.20.5.1706.7E-696114No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MSDSKSISWT WTELINAVPD AEEVLSSIFN GENLQEIQSQ QSPPPPLQNQ NTINPQLPTV  60
ILLEETEEEQ KKKKILIKNR ASAARSRARK LERIKFLEEQ VETLKEENAK LKRIILEETL  120
RRRCQKIQVE MIKETTAKKL KEQRRTVSS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A067ESJ36e-99A0A067ESJ3_CITSI; Uncharacterized protein