PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g048456m
Common NameCISIN_1g048456mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 212aa    MW: 23531.5 Da    PI: 8.4373
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g048456mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.71.2e-08111165559
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                        kr +r+  NR++A+rsR+R +a++e+L++++++ ea  + L   +++++ e++ l
  orange1.1g048456m 111 KRMKRLLANRVSAQRSRLRNLAYMEKLKKEIDNEEARLSVLLPLVSHYETECKVL 165
                        99*****************************999988888888888888888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-6107171IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-8111166No hitNo description
PfamPF001707.2E-7111142IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-8111165No hitNo description
PROSITE patternPS000360114129IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MLNRTRSFSS SSGISMENLA SLRRSASDSL ALMSSTNVIK IGVGDNFSFE GDVETRKGDD  60
DNNNNNHLNY SSDKKPSSAN NEVRALTPID SSSKIEPQKS VASNDHGKGP KRMKRLLANR  120
VSAQRSRLRN LAYMEKLKKE IDNEEARLSV LLPLVSHYET ECKVLGKMNR EMKEMMEALE  180
NETAAKEAEF QALMEEKEAL GLAYRLLGEG K*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015386694.11e-151basic leucine zipper 34-like
TrEMBLA0A067ESA51e-150A0A067ESA5_CITSI; Uncharacterized protein
STRINGEOY071195e-18(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1865168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.22e-16bZIP family protein