PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000056-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 184aa    MW: 20785.4 Da    PI: 10.5458
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000056-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.5e-173478351
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                    y GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a++
  AUR62000056-RA 34 YLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAAR 78
                    88******.**********965...5********************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MSTNSNTAIK TPSPRSKRKH NQQQQESPPS TIRYLGVRRR PWGRYAAEIR DPTTKERHWL  60
GTFDTAEEAA LAYDRAARIR ADFAPIYIVA GFVIIAGGIA SHTGYQQLVH NPNVYFNKKK  120
REMINELENP MQAVNHGGRY VDNSFLRKVA HVQDKGKETV PNPVNGNIYT RSRHAETLES  180
IKS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-20ERF family protein