PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000115-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 307aa    MW: 33717.3 Da    PI: 5.5075
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000115-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding262.2e-084331948
                     TTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqkyl 48
                      G g+W+ +ar  g+ R++k+c++rw +yl
   AUR62000115-RA  4 NGQGCWSDVARNAGLQRCGKSCRLRWINYL 33
                     57889***********************97 PP
2Myb_DNA-binding52.51.2e-163982146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++
   AUR62000115-RA 39 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 82
                     89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MLTNGQGCWS DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEELI IHLHSLLGNR  60
WSQIAARLPG RTDNEIKNFW NSTVKKRMKS SSTSSSPNAS DSSLSTEPRD GMVGGFMAMQ  120
DPCSIMAINN NTTNSLDMSS CGNGYMDGSS CMSMAPMHHG MGNGDDHGMM CGSYGMLGSH  180
NYNYGLLQGE LSIPSLETIS IEENTQVSEN IVFGRNTTIS NNNNHFDNNN SNNHFDHNHH  240
IISGTNNTTP LNNSITSSGA KKFEATVVPG VGINWEGRDD SSLGEWDLEE LMRDVSSFPF  300
IDYQVE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.13e-43MYB family protein