PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000213-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 218aa    MW: 24828.9 Da    PI: 8.8626
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000213-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.1e-16105155356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y GVr+++ +gr+++eIrdps   k  r++lg++ ta eAa+a+++a+  ++g+
  AUR62000213-RA 105 YIGVRRRP-WGRFASEIRDPSR--KGYRIWLGTYNTAIEAARAYDRAAFDIRGH 155
                     88******.**********854..34***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MVVVVVSSVD LGQGLILVVD LIGGVVVDSG RPFSGVHGGG RPVFGGARVR VRVSRHCLDD  60
TRLQYIYSSL DEEGIDYDET FRAFCIEPRK VGHKEDRRHN NSGNYIGVRR RPWGRFASEI  120
RDPSRKGYRI WLGTYNTAIE AARAYDRAAF DIRGHKARLN FPHEVECWSS STKRTIDQVQ  180
RLGEKRQRID NGERELENNY CSYDDDDQLI FKLPKLI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.16e-19ERF family protein