PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000536-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 249aa    MW: 28246.9 Da    PI: 8.7112
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000536-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.93.1e-3057754128
             NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ +   ++ g+kk Lvfy g+apkg+kt+W+mheyrl
  AUR62000536-RA   5 GEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK--PKTLGIKKALVFYAGKAPKGVKTNWIMHEYRL 77 
                     579************************************98..778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MALYGEKEWY FFSPRDRKYP NGSRPNRAAG TGYWKATGAD KPIGKPKTLG IKKALVFYAG  60
KAPKGVKTNW IMHEYRLANV DRSAGKRTNL RLDDWVLCRI YNKKGVIEKD YSIDQNSKPM  120
SMPNSMAQYS DFEDQKPNIS TPGQTVPMGY MTPSPIPPAK NDLLHFDTSD SVPRCHTDTS  180
GSNHVASPEF MCDKEVQSDP KWNELGKNNL DFPSFNYMDP FPEDPFASTA QFQNDQMTNF  240
QDIFMLLR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.19e-85NAC family protein