PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000606-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ZF-HD
Protein Properties Length: 245aa    MW: 27681.8 Da    PI: 8.2943
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000606-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer94.77.4e-303284358
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                     + YkeClkNhAaslG+h++DGCgEfmp    +g+ +a+ C+ACgCHRnFHR+e++
  AUR62000606-RA 32 MILYKECLKNHAASLGSHSTDGCGEFMPP---SGDNDAFLCSACGCHRNFHRKEEV 84
                    678*************************9...5678*****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MSDSSTQAGD EHNTILTTKK YENGRSNSKE MMILYKECLK NHAASLGSHS TDGCGEFMPP  60
SGDNDAFLCS ACGCHRNFHR KEEVEVAHVG SNNYTYLSYY HYQRNTSNIT KNQVQECHQD  120
KVTALTARHG SHNSPSLNVG PAATPSENDG EQIMVEGMKM SKKRHRTRFT NEQKEKMLGF  180
AQKTNWKIQR VDEGLVQQFC QEVGIKRRVL KIWMHNNKYL FVKKGTNSTL NDHDASDSSD  240
KLNE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.18e-52ZF-HD family protein