PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000786-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 256aa    MW: 29448.7 Da    PI: 10.3577
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000786-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.12.1e-101632371588
                     -EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3  15 rlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                      l +p   ++++     k++ s t+ l++++g s evk+  +k+ +r+ l+ GW+eF    +++ gD + F+++  +
  AUR62000786-RA 163 DLFIPAGIFKTYnivAPKPNHSGTILLRNQRGYSLEVKF--WKRVDRFALSHGWREFQINSDIDKGDECEFEVILGE 237
                     57888888988888855667888****************..*******************************77333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MAKREQGTSS YSDETKDSQP RSEPKVVDGT MLKPKRGRPF KMNDLRYLPG FFKIYLPEYN  60
SKELVIPRDF VRNFSGKIDK NVNLRNLQGK TWKMDYNGNA TFTVEIFGVN GCKKEEATAT  120
NGQPHVDARG TKTKSQVTTN VRRRTIPLNN IRFRRVYEGC LYDLFIPAGI FKTYNIVAPK  180
PNHSGTILLR NQRGYSLEVK FWKRVDRFAL SHGWREFQIN SDIDKGDECE FEVILGEGRK  240
IKEIILLQVR PTNSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60130.23e-06B3 family protein