PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000818-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 133aa    MW: 15417.6 Da    PI: 9.2047
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000818-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.92.3e-104364526
                    --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                     C+ ++r+G C++Gd C FaHg
  AUR62000818-RA 43 VCPEYRRSGSCSRGDECDFAHG 64
                    7********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MYEFKVRKCT RSRSHDWTDC PFSHPGEKAR RRDPRRFHYS GTVCPEYRRS GSCSRGDECD  60
FAHGVFECWL HPARYRTEAC KDGKSCKRKV LLCTFSYFYF IRVVQLLPTN VTHESGRGTT  120
AFSVLGPSVC MW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44260.17e-57C3H family protein