PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000871-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 212aa    MW: 23485.3 Da    PI: 6.4023
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000871-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.5e-12250455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++++k+L+
  AUR62000871-RA  2 THIAVERNRRKQMNEYLNVLRSLMPES---YVQRGDQASIVGAAINFVKELE 50
                    8**************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MTHIAVERNR RKQMNEYLNV LRSLMPESYV QRGDQASIVG AAINFVKELE HNVQNLSAKK  60
QMKENLESNG NSSSSTMPFG EFFTFPQFSS NSNVDNEDQT KASDATSPQQ LDHASVRGSG  120
DSGGLAADVE VTMVESHAHL KIRLRRPPKQ LSKLVSGLHS LRLSILHLNV NTADDGVVLY  180
SFSLKVEDES KLNSVDEIAR EVYQLLGRIQ E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.19e-62bHLH family protein