PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001044-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 230aa    MW: 26383.7 Da    PI: 5.0411
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001044-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.63.7e-1726721056
                    HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    e +++Le++Fe +++++ e++ ++A+++gL+ rqV +WFqNrRa+++
  AUR62001044-RA 26 EKVKALEKHFEVENKLQPERKVKIAEEVGLEPRQVAIWFQNRRARWR 72
                    6789******************************************9 PP
2HD-ZIP_I/II113.21.7e-3619110293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     kk rl  e+vk+LE++Fe e+kL+perKv++a+e+gl+prqva+WFqnrRAR+++kqlE++y  L+++ydalk++  +Le+e+ +L  +l++
  AUR62001044-RA  19 KKSRLCLEKVKALEKHFEVENKLQPERKVKIAEEVGLEPRQVAIWFQNRRARWRAKQLEREYGDLRASYDALKHDYGSLEQEKVDLLGQLND 110
                     99***********************************************************************************9988875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MLERLEEEDN ADTSRQLMKK SRLCLEKVKA LEKHFEVENK LQPERKVKIA EEVGLEPRQV  60
AIWFQNRRAR WRAKQLEREY GDLRASYDAL KHDYGSLEQE KVDLLGQLND LRSKIESRNS  120
EMTTTNTLSN PITINSTNIM NEGTCMNVPL QASPTPSCRT LDPYDMSSST VTATTLSLDG  180
LQLCKAYQDQ IIKMEELGVH NMNNDISGNF FSVDQAPTLH YWYNSDQFN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65310.21e-40HD-ZIP family protein