PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62001307-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 463aa MW: 51087 Da PI: 5.1018

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62001307-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.6	5.9e-33	238	292	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHerFveav++L G+ekAtPk +l+lm+v+g+t++hvkSHLQkYRl AUR62001307-RA 238 KPRMRWTPELHERFVEAVKKLDGPEKATPKGVLKLMNVEGITIYHVKSHLQKYRL 292 79****************************************************8 PP
2	Myb_DNA-binding	55	1.9e-17	240	291	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++v+avk+l g+ t+k + + m+ +g t +++ks++qky+ AUR62001307-RA 240 RMRWTPELHERFVEAVKKLDGPekaTPKGVLKLMNvEGITIYHVKSHLQKYR 291 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MNHPSRACLI ASESSKGTTA FCQALPSLDF SSVETYQGSV SSESSYPLLK QLGKLRLPSG 60 PSDIFSSSCD SHLKSTPSRS SMFCTNLYLS SSTSSEAQRQ LGNLPFLPSP SAPRSTKTQL 120 VLNEDTDSHC EQKHSEDSYR DFFNYSGSFS DGDFDDVTCG SDSLAFSERL ELQLLSDELQ 180 LAITDNGENP GIDEIYEASP VALRPGIPST VQNNAQPVSP SLCVISCNKT PEAGASHKPR 240 MRWTPELHER FVEAVKKLDG PEKATPKGVL KLMNVEGITI YHVKSHLQKY RLAKYVPERK 300 EVEKKTSSSE EEKSDSSTKE SDASKKGSIN EALRMQIEVQ KQLHEQLEVQ RALQVRIEEH 360 ARYLQKILEE QQKAQTALVS SQSLSSVTSE EPEMELCPRS PFISPESPPK PAESKTDVSI 420 TLPSKHTNED SEHQPCQKKP RLEDESKPEP ISDVPPVVDI SL*

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MNHPSRACLI ASESSKGTTA FCQALPSLDF SSVETYQGSV SSESSYPLLK QLGKLRLPSG  60
PSDIFSSSCD SHLKSTPSRS SMFCTNLYLS SSTSSEAQRQ LGNLPFLPSP SAPRSTKTQL  120
VLNEDTDSHC EQKHSEDSYR DFFNYSGSFS DGDFDDVTCG SDSLAFSERL ELQLLSDELQ  180
LAITDNGENP GIDEIYEASP VALRPGIPST VQNNAQPVSP SLCVISCNKT PEAGASHKPR  240
MRWTPELHER FVEAVKKLDG PEKATPKGVL KLMNVEGITI YHVKSHLQKY RLAKYVPERK  300
EVEKKTSSSE EEKSDSSTKE SDASKKGSIN EALRMQIEVQ KQLHEQLEVQ RALQVRIEEH  360
ARYLQKILEE QQKAQTALVS SQSLSSVTSE EPEMELCPRS PFISPESPPK PAESKTDVSI  420
TLPSKHTNED SEHQPCQKKP RLEDESKPEP ISDVPPVVDI SL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	3e-75	G2-like family protein