PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001356-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 451aa    MW: 48590.7 Da    PI: 5.3013
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001356-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.92.5e-17372408135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt++  Tp++Rrgp+g++tLCnaCGl+++ kg+
  AUR62001356-RA 372 CRHCGTSEksTPMMRRGPEGPRTLCNACGLMWANKGT 408
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
LPEEETAEVG APVEEEGGSS PDAPNTHSDR ILESEQGYCE EAFSVSGFEG DDEAEPEKRD  60
GEETGSVSRS ERDGGETTSR SGTENSGSGS LSPVEDSEAE ERKKWNHKGD PFQIHDGDKG  120
ALMSFTMLFK RKQDNDVTSS AMSRRVSSAQ MAPDLPLGTG RLTIGRKSIK NLGLGIDIAK  180
KSGAIEVSKS SELPKVARRA AAAPGEGIDG ELHNDPGNVS DTHGGMMVAN GDNNQLTLSF  240
QGQVYVFDSV SPEKVQAVLL LLGGREVPST VPAPPLTSVN NRGVAPTPQR FNVPQRLASL  300
LRFREKRKER NFDKKIRYTV RKEVALRMQR NKGQFTSSKP NQDESSSGAT SWESNQNWGP  360
DGPLPIQQEV CCRHCGTSEK STPMMRRGPE GPRTLCNACG LMWANKGTLR DLSKSAVPGG  420
QNLPFTRNEE NGNFEAGQIM RVAGNVSDSA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-106GATA family protein