PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62001481-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

GRF

Protein Properties

Length: 249aa MW: 28171.7 Da PI: 9.2152

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62001481-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	69.9	3.2e-22	82	125	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CE+H+hrg+++++k+++ AUR62001481-RA 82 DPEPGRCRRTDGKKWRCSKEACSDSKYCEKHMHRGKNKTKKQVQ 125 79***************************************986 PP
2	QLQ	43.3	1.1e-15	14	47	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FTa+Q+q+L++Q+l + y++++ PvPpeL a+ AUR62001481-RA 14 PFTASQWQELEQQLLTFNYILSGIPVPPELFSAV 47 8****************************97765 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MMISGRNNHK SHFPFTASQW QELEQQLLTF NYILSGIPVP PELFSAVIRN PFTSSSSALF 60 PNQQSIPFGW GCFQMGYGRK IDPEPGRCRR TDGKKWRCSK EACSDSKYCE KHMHRGKNKT 120 KKQVQQVFSN TTPKSSTNDP SFSTSSPKIN LKTCIPNSPA ISCSISPSDN DIAATYPYIM 180 GQKAQAHSYQ PTTFYPFMSP QSDSTNFTQS TQNFTAPHWL LDSESYDQPK KEMRFDSNLS 240 SFLYICFK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-49	GRF family protein