PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001502-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 285aa    MW: 31483.7 Da    PI: 9.126
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001502-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.25.8e-33134189258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +p+YVNaKQy++Il+RRq+Rakle+++kl +k+rkpylheSRh+hAl+R RgsgGrF
  AUR62001502-RA 134 DPIYVNAKQYHGILRRRQHRAKLEAQNKL-AKNRKPYLHESRHQHALKRTRGSGGRF 189
                     7****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGVPAQRYQG AKLLDFSFQD QDSCSTQSTG QSYTSSASFG ENDLRTQSMS FAQSGYNTHG  60
KHESGEYKFN FSMGTQDYTL PPLQTDFNQA VPQFAVTFPD QHYNSVMSTY APQAVMVGIM  120
PARVPLPLDF SASDPIYVNA KQYHGILRRR QHRAKLEAQN KLAKNRKPYL HESRHQHALK  180
RTRGSGGRFL NMKKLQESNT SAQNTKDHNK VSGAISLHLA GKASGAEVRQ QENHREGTST  240
TSCSDVTSTS NSDDIYHPLE FRFSNYSSGY GEAVLGGGSA ENYI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.11e-44NF-YA family protein