PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62001762-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

GRAS

Protein Properties

Length: 1434aa MW: 162601 Da PI: 5.8209

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62001762-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	351	1.8e-107	316	672	1	359
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cAeavs +l+ a++lL++++++a+p gd++qR+a+yf+++L+ar+++++selyka ++ s s + l ++l++ + P+ + +h AUR62001762-RA 316 LRTLLIQCAEAVSCAELRTANELLKQIRQHATPFGDSVQRIAHYFANGLEARMTGTGSELYKASDWKRFS---SYDILRGYRLYVSALPFQRTTH 407 6789********************************************************99999998...99**************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 +aNq+I + +e++ ++HiiDf+i +G+QWp+L+q+L+ Rp gpp+l+iTgv++p+sg ++++eetg+rLa ++e++gvpfef++ +a+r+++ AUR62001762-RA 408 YVANQTIAKLAEKAPKIHIIDFGIFMGFQWPCLIQTLSRRPLGPPRLKITGVDNPKSGfkPAQTVEETGRRLAGYCERFGVPFEFQA-IAQRWHT 501 *****************************************************999***********************.7** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 +++e+++++++E ++V++ ++ rl+de+v+ s+rd++Lklv+sl+P++++ + n++ F +rf eal++ys+lfd +ea++ re+++r+ AUR62001762-RA 502 IKPEDFNIEKDELVVVSCLYKSRRLPDETVDAGSPRDTFLKLVRSLNPDLFINGVVNGTFNAPFFITRFREALYHYSSLFDVFEATMLREDQQRQ 596 ******************************************************************************************* PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359 +E+ l g++++n+vaceg+er+er et+++W+ r ++aGF +vpl++ ++++a++++r +++ ++ve+++++lv AUR62001762-RA 597 LIENYLYGKDAMNIVACEGSERIERPETYKQWQVRHKRAGFMQVPLDQGIVNTARAMVRANYQKDFMVEQDRHWLV 672 **********************************************************999******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1434 aa Download sequence
MYFVPEEGYP SFSSSERCVN GNGSFQNYGL YEEPISVNDP LYDQYYQTHE DNSEIPDFSD 60 ACLKYMNDIL MEEDLDDNPA TLQDYHALQA TEKSFYDVLA GETYPLCPDQ RPLSDDLNIN 120 CSNQGSSGCY GVGVESNWLI HQSLSEGFQH IDDTHHVLES TSEGSGSSSS INCLKDGVAD 180 SPVSTLFVNE LSSVVNSGIS RAYKEKNYEG IGDSREEQGY GSRGRKNLHR ENTGQVEERS 240 AKQLATNNEE YSEMEKFDDA LMISKEENND ILTCISNNAV KDAIQDSEQD EEPKGSKSKR 300 RAKRGKKKTS TEVVDLRTLL IQCAEAVSCA ELRTANELLK QIRQHATPFG DSVQRIAHYF 360 ANGLEARMTG TGSELYKASD WKRFSSYDIL RGYRLYVSAL PFQRTTHYVA NQTIAKLAEK 420 APKIHIIDFG IFMGFQWPCL IQTLSRRPLG PPRLKITGVD NPKSGFKPAQ TVEETGRRLA 480 GYCERFGVPF EFQAIAQRWH TIKPEDFNIE KDELVVVSCL YKSRRLPDET VDAGSPRDTF 540 LKLVRSLNPD LFINGVVNGT FNAPFFITRF REALYHYSSL FDVFEATMLR EDQQRQLIEN 600 YLYGKDAMNI VACEGSERIE RPETYKQWQV RHKRAGFMQV PLDQGIVNTA RAMVRANYQK 660 DFMVEQDRHW LVQEHVSIGG KKFTKNTSDG FLRTKDSSVN KMAANLKARL DEALSTHQNE 720 ILMFFSRVET HGKAILQRQQ LLAEFEELNL ADGLKEKFVL ELDFEPSCGS LNLPSLPQSI 780 GNGAEFLNCS LSAKMFQDGK GMVNLLDFLR AHHYKGKSLM LNDKIEDLNA LKSALLNAQE 840 YLLAQPPTTP YSDFEMKLQE IGFERGWGDN AERSLGMISL LLGLINAPDP SSLEKFLSRI 900 PLVFNLVILS PHGYFAQENV LGYPDTGGQV VYILDQVRAL EAEMILRIKQ QGLDIIPRIL 960 IVTRLLPDVA GTTCGQRLER VYGTQNSDII RVPFRTKKGM VKKWISRFEV WPYLETFTEE 1020 VANELSKELQ TTPDLIIGNY SDGNMVALLL AHKLGVTMCT IAHALEKTKY PNSDVYWKEF 1080 EDKYHFSCQF TADLIAMNYT DFIITSSFQE IAGNKNKVGQ YESHMAFTLP GLFRVVNGVN 1140 IFDPKFNIVS PGADMSIYFP YTKKELRFTQ LHPGLEEMLY GSVENKEYMG VLKDRNKPII 1200 FSMARLDRVK NITGLVEWYG KSKRLQELVN LVIVAGDRSK ESQDFEEREE LKKMYELIGK 1260 YNLNGKFRWI SVQMSRMKNG ELYRYIADTK GAFFQPALYE AFGLTVIEAM TSGLPTFATC 1320 NGGPAEIIAH GKSGFHIDPY QGDKAAELIV DFFEKCKVDP THWELISKGG LERIQEKYTW 1380 KIYSKKLLTL AGVYGFSKYT SKPDKSKANR YIDMLMAIGY NKLVESVPLS AEE*

Sequence ? help Back to Top

Protein Sequence Length: 1434 aa Download sequence

MYFVPEEGYP SFSSSERCVN GNGSFQNYGL YEEPISVNDP LYDQYYQTHE DNSEIPDFSD  60
ACLKYMNDIL MEEDLDDNPA TLQDYHALQA TEKSFYDVLA GETYPLCPDQ RPLSDDLNIN  120
CSNQGSSGCY GVGVESNWLI HQSLSEGFQH IDDTHHVLES TSEGSGSSSS INCLKDGVAD  180
SPVSTLFVNE LSSVVNSGIS RAYKEKNYEG IGDSREEQGY GSRGRKNLHR ENTGQVEERS  240
AKQLATNNEE YSEMEKFDDA LMISKEENND ILTCISNNAV KDAIQDSEQD EEPKGSKSKR  300
RAKRGKKKTS TEVVDLRTLL IQCAEAVSCA ELRTANELLK QIRQHATPFG DSVQRIAHYF  360
ANGLEARMTG TGSELYKASD WKRFSSYDIL RGYRLYVSAL PFQRTTHYVA NQTIAKLAEK  420
APKIHIIDFG IFMGFQWPCL IQTLSRRPLG PPRLKITGVD NPKSGFKPAQ TVEETGRRLA  480
GYCERFGVPF EFQAIAQRWH TIKPEDFNIE KDELVVVSCL YKSRRLPDET VDAGSPRDTF  540
LKLVRSLNPD LFINGVVNGT FNAPFFITRF REALYHYSSL FDVFEATMLR EDQQRQLIEN  600
YLYGKDAMNI VACEGSERIE RPETYKQWQV RHKRAGFMQV PLDQGIVNTA RAMVRANYQK  660
DFMVEQDRHW LVQEHVSIGG KKFTKNTSDG FLRTKDSSVN KMAANLKARL DEALSTHQNE  720
ILMFFSRVET HGKAILQRQQ LLAEFEELNL ADGLKEKFVL ELDFEPSCGS LNLPSLPQSI  780
GNGAEFLNCS LSAKMFQDGK GMVNLLDFLR AHHYKGKSLM LNDKIEDLNA LKSALLNAQE  840
YLLAQPPTTP YSDFEMKLQE IGFERGWGDN AERSLGMISL LLGLINAPDP SSLEKFLSRI  900
PLVFNLVILS PHGYFAQENV LGYPDTGGQV VYILDQVRAL EAEMILRIKQ QGLDIIPRIL  960
IVTRLLPDVA GTTCGQRLER VYGTQNSDII RVPFRTKKGM VKKWISRFEV WPYLETFTEE  1020
VANELSKELQ TTPDLIIGNY SDGNMVALLL AHKLGVTMCT IAHALEKTKY PNSDVYWKEF  1080
EDKYHFSCQF TADLIAMNYT DFIITSSFQE IAGNKNKVGQ YESHMAFTLP GLFRVVNGVN  1140
IFDPKFNIVS PGADMSIYFP YTKKELRFTQ LHPGLEEMLY GSVENKEYMG VLKDRNKPII  1200
FSMARLDRVK NITGLVEWYG KSKRLQELVN LVIVAGDRSK ESQDFEEREE LKKMYELIGK  1260
YNLNGKFRWI SVQMSRMKNG ELYRYIADTK GAFFQPALYE AFGLTVIEAM TSGLPTFATC  1320
NGGPAEIIAH GKSGFHIDPY QGDKAAELIV DFFEKCKVDP THWELISKGG LERIQEKYTW  1380
KIYSKKLLTL AGVYGFSKYT SKPDKSKANR YIDMLMAIGY NKLVESVPLS AEE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37650.1	1e-148	GRAS family protein