PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001764-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 663aa    MW: 74879.3 Da    PI: 6.6123
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001764-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS354.12.2e-1082896601374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ecA+avs+ d +  ++lL+++++ +sp+gd++qR+a++++++L+arla+++s+++  +   + s   s + l++++l++ + P+ ++s+
  AUR62001764-RA 289 LRNLLIECAQAVSNIDRRTSNELLKQIRQYSSPHGDSIQRIAHHVANGLEARLAGTGSTISTDICDMKIS---SFDFLNSYRLYVSAIPFKRMSY 380
                     689****************************************************999999888777776...89******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN++Il+ + +++++HiiDf+i  GlQWp+++q+L++Rp+gpp+lRiTg++ p++g   +e++ +tg+rLa +++++gvpf+++  +a+++e+
  AUR62001764-RA 381 IQANNTILKLAVKATKIHIIDFGIFLGLQWPSFIQTLSKRPNGPPELRITGIDFPQQGfrPAERVDATGHRLAGYCKRFGVPFKYQG-IAEKWEN 474
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L+++ +E+++Vn++++  +llde+v ++ ++d++L+l+++++P+++++   +   +++ F +rf eal +ys+ f+ l+a+lpr+++er 
  AUR62001764-RA 475 IQLEDLKIEGDEMVIVNCMFRSGTLLDETVGQNCPKDAFLRLIRHINPNLFIHGIVNGTFTTPFFITRFKEALFHYSSAFEVLDATLPRNAHERL 569
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +E e+ g+ei nvvaceg er++r et++kW+er ++aG+++vpl+ + +++ k++++  + + + v+e++ ++++gWk+r++ ++S W+
  AUR62001764-RA 570 LIESEMYGKEIINVVACEGVERVQRPETYKKWQERSSRAGLQQVPLDREFVSKTKAMVKANYLKDFFVDEDKYWMLQGWKGRTICALSLWK 660
                     **************************************************************777*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 663 aa     Download sequence    
MGSNPTYENF FQNPEFEKHE SQVSLEAPHL ISENTSPLDQ NESNNSCLKI PNHCLKYISD  60
ILLKEDLDEN PASAQEHWAL QATEKSLYDA LGESYPFQHL YTPSPDCFPS SSDRNTISLD  120
DSSSGNSFSS FESNWGPSQP QLDLTTVNVD DFVQSFLELN PQPSGSSSKD GDDEEVNDVV  180
VSKKPLSTTS KKGEKPVKGS RRKKSRQRDD VDYEGGRCNK LQATSSEDYA ELEQYDDVLL  240
CNENKMHASL SPKECSAVEA RGKLSKTKGH GSRGARGKKQ NIKVDEVDLR NLLIECAQAV  300
SNIDRRTSNE LLKQIRQYSS PHGDSIQRIA HHVANGLEAR LAGTGSTIST DICDMKISSF  360
DFLNSYRLYV SAIPFKRMSY IQANNTILKL AVKATKIHII DFGIFLGLQW PSFIQTLSKR  420
PNGPPELRIT GIDFPQQGFR PAERVDATGH RLAGYCKRFG VPFKYQGIAE KWENIQLEDL  480
KIEGDEMVIV NCMFRSGTLL DETVGQNCPK DAFLRLIRHI NPNLFIHGIV NGTFTTPFFI  540
TRFKEALFHY SSAFEVLDAT LPRNAHERLL IESEMYGKEI INVVACEGVE RVQRPETYKK  600
WQERSSRAGL QQVPLDREFV SKTKAMVKAN YLKDFFVDED KYWMLQGWKG RTICALSLWK  660
RC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-159GRAS family protein