PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001768-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 757aa    MW: 84533.6 Da    PI: 5.8064
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001768-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS357.81.6e-1093837531373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+  +s+d + a++lL++++e++s  gd  qRla+yf++AL+arla+++s++y al++ +ts    ++ l+a+++f  ++P+ k+s 
  AUR62001768-RA 383 LRTLLTLCAQSTASDDRRTADELLKQIREHSSAGGDGSQRLAHYFANALEARLAGTGSQIYTALSSMKTS---AADMLKAYQFFIRTCPLKKISI 474
                     5789************************************************************999999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                       aN++I +a+e+++++HiiDf+i +G+QWpaL+q L+ R++gpp+l iTg++ p++g   +e++e+tg+rLak++e+++vpf++++ va+++e+
  AUR62001768-RA 475 GFANHTIIKAAEKASKLHIIDFGILYGFQWPALIQGLSHRDGGPPKLCITGIDLPQPGfrPAERVEATGRRLAKYCERFNVPFKYHA-VAQKWET 568
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++++E++aVn+ ++ ++llde+  ++s+r++vL+lv++++P+v+v+   + ++n++ F++rf eal ++s+lfd+++++++re+ er 
  AUR62001768-RA 569 IRVEDLKIESDEVVAVNCLYRFKNLLDETIVVDSPRSAVLNLVRNVKPNVFVHGVVNGSYNAPFFVTRFREALFHFSTLFDMFDTNASREDPERL 663
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     + E+e+ grei+nvvaceg+er+er et+++W++r  ++GF+++pl+++  +  ++ ++ ++ + + ++ + ++ + gWk+r   +++aW
  AUR62001768-RA 664 MFEKEFYGREIMNVVACEGTERVERPETYKQWQARNIRVGFRQMPLDQELINMLRCKVKGHYHRDFVIDVDGQWTLHGWKGRITHVITAW 753
                     **************************************************************999************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    
MGSQYGEFSD SFVNEIGNQP VNGMMSRGYD ESLNYANLFN YKDPSQDLSS LNLPSPLANP  60
DALNLSLFSG ASQGGVELSD DSDSDDVLKY ISQMLMEEDM EQKPCMFHDP LALQATEKPF  120
YDALGQKYPP SPNQHPLIDH GVDSPDDRPW SSSSDSSGST CSSSSNSTNY VETTMVTDLS  180
DHSKPLVIQS HPIRSYSQPS TLSQWSFGSS SSFGGSTSNG STLSAFGLPI DMNFFSEKES  240
IIQFQKGMEE ASKFLPKNNN IVIDLDNINF SDESRHDASF VVVKKEKDEN SPDGSRTSKI  300
HYREDEDPDE GRRSSKQSAV SIDEAELSEM FDKVLLCHNP GHNCSINEDS KKSLPSPASQ  360
PQGPEVGKGR PRKQGNTKST VDLRTLLTLC AQSTASDDRR TADELLKQIR EHSSAGGDGS  420
QRLAHYFANA LEARLAGTGS QIYTALSSMK TSAADMLKAY QFFIRTCPLK KISIGFANHT  480
IIKAAEKASK LHIIDFGILY GFQWPALIQG LSHRDGGPPK LCITGIDLPQ PGFRPAERVE  540
ATGRRLAKYC ERFNVPFKYH AVAQKWETIR VEDLKIESDE VVAVNCLYRF KNLLDETIVV  600
DSPRSAVLNL VRNVKPNVFV HGVVNGSYNA PFFVTRFREA LFHFSTLFDM FDTNASREDP  660
ERLMFEKEFY GREIMNVVAC EGTERVERPE TYKQWQARNI RVGFRQMPLD QELINMLRCK  720
VKGHYHRDFV IDVDGQWTLH GWKGRITHVI TAWVPA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein