PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001834-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 249aa    MW: 26318.6 Da    PI: 7.1269
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001834-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.00011101123123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  F++   L  H+r+H
  AUR62001834-RA 101 HSCKICGVEFPTGQALGGHMRRH 123
                     79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MNTIASMVKR GGAGEIETSA MANCLMLLSA HSAAVKSVGG GSSENSEGGV GRMFACKTCD  60
RKFSSFQALG GHRASHKKIK SPNSGDSSDD LTSFPAKPKA HSCKICGVEF PTGQALGGHM  120
RRHRETLASV GGGSAAAALS SVTTEGSIGN SDGNNGGEKK RKINNDVVSE FPVMMKSGSC  180
KRVCLDLDLS LWKKKEDNVA AVINNDDYEI EEGEIVEQHD GKSGDVKNNV EEEKDILKLE  240
LRQPINCW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.14e-26C2H2 family protein