PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001908-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 173aa    MW: 19085.5 Da    PI: 6.4128
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001908-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.000782446123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y C++Cg+ F ++  L  H++ H
  AUR62001908-RA 24 YLCKYCGRDFLNPQALGGHQNAH 46
                    66*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MEGLNDHESF YTTSSKEGLS FKIYLCKYCG RDFLNPQALG GHQNAHRIER REVRLHKQAK  60
VFSLMMANFG LSMMPYHFIQ PHGVELNQNS VAEGSSFISS PSHSHWLGSY RLGDGAQNCN  120
DPASIITKHV MNKARVEDGG ADQELLVEDG GAPAQPGLRL ELPDLNLDYA PI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05120.16e-10C2H2 family protein