PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001930-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 209aa    MW: 23226.3 Da    PI: 9.1292
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001930-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.85.6e-36101012102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+ye+++d++ +++isw eng++fvv+++ efak++Lpk+Fkh+nf+SFvRQLn+YgF+k+  ++         weF+++ Fkk++k+ll+ 
  AUR62001930-RA  10 FLTKTYEMVDDKTSDDVISWGENGSTFVVWKTAEFAKDLLPKFFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANDRFKKDQKDLLSG 95 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  AUR62001930-RA  96 IRRRKA 101
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MGQRSIPAPF LTKTYEMVDD KTSDDVISWG ENGSTFVVWK TAEFAKDLLP KFFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANDRFKKDQK DLLSGIRRRK ATLAGKATGA VTSPSISGDD  120
AGSTSTSSPG SIEIADLSGE NEKLRRDNEM LNSELAQTKK QCEELMGFLT ARLKVGPDEI  180
NHILGQGMVV ACGAHKDGWW GQEKRKML*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.13e-73HSF family protein