PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001935-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 197aa    MW: 21732.7 Da    PI: 8.899
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001935-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.5e-18117166255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     +   r++lg+f tae+Aa+ +++a+ +++ 
  AUR62001935-RA 117 RFRGVRQRP-WGKWAAEIRDP-----HraVRVWLGTFETAEDAAREYDRAAVRFRE 166
                     69*******.**********7.....338**********************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEATSNQYYV YNDRPRSWQL SPEQEMNVMV SALRNVIAGG RGGSVGGSGS QNPSDDGSRL  60
VLEALQQNQN TSTSSPSASA TSLNFPPNSE NSNNGRNSST SGGNGGPKRR RKYNRNRFRG  120
VRQRPWGKWA AEIRDPHRAV RVWLGTFETA EDAAREYDRA AVRFREPETS GFVQIADGME  180
ISSWVDDMID NSPPFE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.14e-14ERF family protein