PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001936-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 246aa    MW: 27925.3 Da    PI: 4.8258
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001936-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19111160255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W++eIrdp     +   r +lg+f taeeAa+a+++a+ +++g
  AUR62001936-RA 111 KYRGVRQRP-WGKWASEIRDP-----HraVRMWLGTFETAEEAARAYDRAAVRFRG 160
                     8********.**********7.....338************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDSTQNYYFY DEKPDIWHSE SNHEMNMMVS ALNQVISGGG SGIDQQPPSD GSHLIFESFQ  60
DQQNFATWSP ASSTTSPVLP PNSQIENADT TTSSSSSNSG KQRTRKYNRN KYRGVRQRPW  120
GKWASEIRDP HRAVRMWLGT FETAEEAARA YDRAAVRFRG PRAKLNFSVS DYLPQLEEYS  180
SNNIFYQNQE QQTNNNNNHV SPTNQEPETS GFVQITDGAE LEHWMNDMID NTPPCLMYGE  240
QSFGI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.17e-19ERF family protein