PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62001970-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 311aa MW: 32903.5 Da PI: 8.7707

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62001970-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.2	2e-39	79	137	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCdstntkfCyynny+l+qPr+fCk+CrryWtkGG+lrnvP+Ggg+rknk++ AUR62001970-RA 79 QQNLRCPRCDSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGTLRNVPIGGGCRKNKST 137 7899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MIQELLGGSS APTSFLGERK ISIPFSSPPS TTCPFTTPIL TTTSIATTAS SATLVNSQTG 60 GGNNNNNNNS NSSEANASQQ NLRCPRCDST NTKFCYYNNY NLTQPRHFCK TCRRYWTKGG 120 TLRNVPIGGG CRKNKSTTVS GSSTPSGLVK SSSNAMAKAK ATLSSELLVN GNPGFLGSGL 180 LDHLHHHPDL QSGCSNPILW PSLQPNSHIL SLLRDFMQNN GSNSNILELY QRLKSSSNYN 240 NYCGNENQGT VILGNMVGSA SPSSPMHSTI LDSAPVGGGD HNYGGYSFMS SPAMSGWSDY 300 PIAPVNGAYP *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-33	Dof family protein