PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001996-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 252aa    MW: 28242.9 Da    PI: 6.3113
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001996-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H224.57e-08108130123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ Cgk F+r  nL+ H+r H
  AUR62001996-RA 108 HTCQVCGKGFKRDANLRMHMRAH 130
                     79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MTDPVDTLHL PPPEYTASDD PLTNLSTIRN RVDSLSHILS NSVNGTAPIS IDQSNTISAE  60
LTAAIHSVVI NGAALLTAAT SSSPTHVDGD DLEIVELDLM ELTAEHSHTC QVCGKGFKRD  120
ANLRMHMRAH GDKYKNIESL SKPDKHKYSD IYGRNTRFSC PYAGCIRNKR HKEFRPLKSV  180
ICVKNHFKRS HCPKKFPCLR WHMPVAEDNN KFDVLEEVQD DFGFGLIEGD QCLQDMDCLW  240
SSFEEEGLLR F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.33e-41C2H2 family protein