PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002036-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MIKC_MADS
Protein Properties Length: 261aa    MW: 28306.1 Da    PI: 5.3231
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002036-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.63.3e-28958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l  +s
  AUR62002036-RA  9 KRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 58
                    79********************************************9997 PP
2K-box25.65e-10661341078
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqie 78 
                     ++++ e lqqe+++L  ++++ + ++R +  + +   s+ eL++ e++L ++l+++ ++K+ ll ++++
  AUR62002036-RA  66 CNSNLEDLQQEVNNLLHQLQMAEDQLRIYEPDPMAFTSMGELESCEKNLIDALSRVSQRKKYLLSNHMS 134
                     68899***********************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGRVKLQIKR IENTTNRQVT FSKRRNGLIK KAYELSILCD IDIALIMFSP SGRLSHFSGR  60
KSPGGCNSNL EDLQQEVNNL LHQLQMAEDQ LRIYEPDPMA FTSMGELESC EKNLIDALSR  120
VSQRKKYLLS NHMSSYDPSG VQIFLDTSEG MPTSFEDIGG IGALPTWHQA YTSTELLNAL  180
MQSNTTSYSS LIKQELAGGA AGVGEAPSAM VTGQQVEAIP ATMGCGIVEI GVGGHIQCSE  240
DASATSASNF DHKIPQLNMQ *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.11e-51MIKC_MADS family protein