PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002048-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WOX
Protein Properties Length: 201aa    MW: 22682 Da    PI: 5.69
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002048-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.92.6e-211777257
                    T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    r+R+t+t+ ql++Le+ F + + +ps+++++e++ +l    +++e++V++WFqNrRa+ k+
  AUR62002048-RA 17 RQRWTPTPVQLQILERIFDQgTGTPSKQKIKEITIELsqhgQISETNVYNWFQNRRARSKR 77
                    89*****************99**************************************97 PP
2Wus_type_Homeobox103.41.6e-331679265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ar+RWtPtp Q++iLe+++++G+ tP+k++i++it eL+++G+i+++NV++WFQNr+aR+++kq
     AUR62002048-RA 16 ARQRWTPTPVQLQILERIFDQGTGTPSKQKIKEITIELSQHGQISETNVYNWFQNRRARSKRKQ 79
                       789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MYCDPLVTAM GHKITARQRW TPTPVQLQIL ERIFDQGTGT PSKQKIKEIT IELSQHGQIS  60
ETNVYNWFQN RRARSKRKQL NNNAQNNAES EVETDAESPK DKKTKPEDFQ SQPNSMLRTD  120
DSCFQNQEIS SSMHTIDSQS GKMDSVFASD GSSKSSQSLS HLGFYESIMQ NPRIDDLIGK  180
IEVPGSYNSY QTTEDYNMTG *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17179RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.14e-61WOX family protein