PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002113-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 132aa    MW: 14738.1 Da    PI: 7.5038
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002113-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-201364256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +g+++AeIrd +    + +r++lg+f taeeAa+a+++a+ +++g+
  AUR62002113-RA 13 KYRGVRKRP-WGKYAAEIRDSTR---HgARVWLGTFNTAEEAARAYDRAAYNMRGH 64
                    8********.**********422...25**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MEDDKDCSGG EVKYRGVRKR PWGKYAAEIR DSTRHGARVW LGTFNTAEEA ARAYDRAAYN  60
MRGHLAILNF PSEYNMPRGG SSSRGGSSSS SSSTRNNVGQ DRAKEVFEFE YLDDKLLEDL  120
LDYDNNKGGR Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.17e-28ERF family protein