PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002206-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 261aa    MW: 28832.1 Da    PI: 9.7879
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002206-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000266486123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C+ +Fs++  L  H++ H
  AUR62002206-RA 64 FTCKYCPGRFSTSQALGGHQNAH 86
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDLKSSSSSL ESPSYSSSSK NTMLDLKLSS FSQDMVSTQH ANGDVAKELS SDHQKRIKPR  60
IRDFTCKYCP GRFSTSQALG GHQNAHKQER ARDKMRQATG FSPYSNTNNT YQPYFGMYNN  120
LPYGGYCKRS PLGVVKTNSM VHKPGSGYRM PMYQGYRHGY GSTNQPKTSL LGNSQLSSYD  180
NLRVSNNNIT NNYSPFNNLN NLSKSLPTLV EGGSAQILRG VDENVIVESD NSEKGELRID  240
GGKLDQVKPE KSGLDLSLRL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.12e-12C2H2 family protein