PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002244-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 163aa    MW: 18402.2 Da    PI: 9.8155
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002244-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.61.6e-064465626
                    -SGGGGTS.--TTTTT-SS-SS CS
         zf-CCCH  6 CrffartG.tCkyGdrCkFaHg 26
                    C++++++   C++G+ C +aHg
  AUR62002244-RA 44 CPDYRASSgNCPRGELCEYAHG 65
                    777777666************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MYSFKVKRCP LMRAHDWTIC PYAHQGERAR RRDLKKVLYV AVSCPDYRAS SGNCPRGELC  60
EYAHGVFEYW LHPTKYRTRF CNAGNRCTRP ICFFAHSLKQ LRAEPMAHIP KWVRLALRTQ  120
QLDLQAPPVK PSLSATSAAT RISSTSGGRE DGCYAGCSLA FN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07500.17e-46C3H family protein