PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002355-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 441aa    MW: 50600 Da    PI: 6.7305
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002355-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS280.45.2e-86584293374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL ecA+ +s+++ ++ q++L+ l+e as +gd  qRla yf++AL a+ ++s+ +ly++l+  e++++  ++ ++ +  f+evsP+ +f+h++
  AUR62002355-RA  58 TLLHECAKTISQKNPSKCQQILWVLNEVASAYGDCDQRLAYYFLKALFAKANNSGLQLYNTLKIIEEKNYCFDTYVKLMLKFQEVSPWTTFGHVA 152
                     6899***************************************************************98889999999888************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191
                      N aIlea++ge+ +HiiD++ + ++QWp Ll+aLa+R++++p+lR+T v+s +s ++  ++e+ ++++kfA+ +gvpf+f+v+   ++l +++ 
  AUR62002355-RA 153 SNGAILEALDGESNLHIIDLSNTLCTQWPMLLEALATRNDETPHLRLTLVVS-TSLETIIIKEITKKMEKFARLMGVPFNFHVIgGLDHLGEIKK 246
                     ****************************************************.667999************************97778******* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerik 284
                     e+L +++gE+++Vn++ +l+r+      +e+ r++v+++++s++P+vv++ve+e+d+  ++++F + f e+l+++   f++le+++ + s+er k
  AUR62002355-RA 247 EDLGLQEGEVVVVNCIQALQRVR-----VEK-RTDVIDMIRSTKPRVVTIVEEEVDLtsTRSDFGKCFEECLRFHRLYFEMLEESFLPISNERLK 335
                     *********************97.....555.889********************99656679********************9999******** PP

            GRAS 285 vErellgreivnvvacegaerre...rhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv..lgWkdrpLvsvSaW 373
                     +Er   +r+ivn +a    e +e   r  ++++W +rl+ea F p ++++++  ++++llr+++ s+   + ++++++   l W+d+++v++SaW
  AUR62002355-RA 336 LERN-RSRNIVNSLAFDDGEIEEeywRPDNASQWTKRLKEA-FCPFHFNDEILGDVQALLRRYNtSWSLALPQRDHEVGihLKWRDETVVWASAW 428
                     ****.9*********987664432338999*********98.**********************88888887665544325************** PP

            GRAS 374 r 374
                     +
  AUR62002355-RA 429 K 429
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MPHSDSLLPK RSTSFPLQLP GKWLMNNQTI KKPLKSYGES SSYVPRSTNN SCVGWVLTLL  60
HECAKTISQK NPSKCQQILW VLNEVASAYG DCDQRLAYYF LKALFAKANN SGLQLYNTLK  120
IIEEKNYCFD TYVKLMLKFQ EVSPWTTFGH VASNGAILEA LDGESNLHII DLSNTLCTQW  180
PMLLEALATR NDETPHLRLT LVVSTSLETI IIKEITKKME KFARLMGVPF NFHVIGGLDH  240
LGEIKKEDLG LQEGEVVVVN CIQALQRVRV EKRTDVIDMI RSTKPRVVTI VEEEVDLTST  300
RSDFGKCFEE CLRFHRLYFE MLEESFLPIS NERLKLERNR SRNIVNSLAF DDGEIEEEYW  360
RPDNASQWTK RLKEAFCPFH FNDEILGDVQ ALLRRYNTSW SLALPQRDHE VGIHLKWRDE  420
TVVWASAWKP NLAPSPQNPS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-109GRAS family protein