PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002393-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 149aa    MW: 16777.4 Da    PI: 9.7441
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002393-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.63.3e-0633721054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++ +++ +L++l+ +      +K + a++L +A+eYI+ L
  AUR62002393-RA 33 KERKEKLGEKITTLQQLVSPY-----GKTDTASVLHEAMEYIRFL 72
                    788899999*********999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MTELKRSVRP IDQDSFTSVA SKRQKVDISM SSKERKEKLG EKITTLQQLV SPYGKTDTAS  60
VLHEAMEYIR FLHEQVKVLS APYLNNTPDT IIEVSNFLIH VFLYRVESMH SGILSSHTNR  120
ASSTSWKMTS VVHLIKLVLF GVPVMHAC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.31e-33bHLH family protein