PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003052-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 344aa MW: 37952.9 Da PI: 6.092

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003052-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.9	0.00021	42	59	2	19
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h+ E+rRR++iN++ AUR62003052-RA 42 RSKHSVTEQRRRSKINER 59 889*************97 PP
2	HLH	16.4	1.6e-05	76	108	19	55
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +f+ Lr+l+P+ ++K + a+ L +++eY++ Lq AUR62003052-RA 76 RFQILRDLIPHG----DQKRDTASFLLEVIEYVQLLQ 108 79*******7....79**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MKSSKGNSPE DDEEYDEDFT SKKEASSSNK DSKNNDKASA MRSKHSVTEQ RRRSKINERQ 60 VEIIKKLMQC DIVTYRFQIL RDLIPHGDQK RDTASFLLEV IEYVQLLQEK VQKYEGPYQG 120 WSTEPTKLMP WRHSHWRVQS FLGHPQAVKN GPGSASTFSG KFDERSFNSN PSVTANAQNP 180 VDADSGHEAY RALDQQSELV EKTAPLPTPF SLHMPTVVQS DGDDSHLSQR PASDGLAAPC 240 PNNCDDQQGE HTIEGGTINI SNSYSHGLLM TLTQALQSSG VDLSQANISI RIDLGKRANQ 300 SQTPGLSGAK DLEISASHDL NMGHAGGESS MENLEQPQKK LKS*

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MKSSKGNSPE DDEEYDEDFT SKKEASSSNK DSKNNDKASA MRSKHSVTEQ RRRSKINERQ  60
VEIIKKLMQC DIVTYRFQIL RDLIPHGDQK RDTASFLLEV IEYVQLLQEK VQKYEGPYQG  120
WSTEPTKLMP WRHSHWRVQS FLGHPQAVKN GPGSASTFSG KFDERSFNSN PSVTANAQNP  180
VDADSGHEAY RALDQQSELV EKTAPLPTPF SLHMPTVVQS DGDDSHLSQR PASDGLAAPC  240
PNNCDDQQGE HTIEGGTINI SNSYSHGLLM TLTQALQSSG VDLSQANISI RIDLGKRANQ  300
SQTPGLSGAK DLEISASHDL NMGHAGGESS MENLEQPQKK LKS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	5e-82	bHLH family protein