PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003245-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 330aa    MW: 38681.4 Da    PI: 9.4981
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003245-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.63.2e-2082171199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk++     +++  l++p+kf +e+ +k   s+ +tl+ +sg sW+  l   ++++ + l++GW++Fvk++ L+egDf+vF+++++s f  +v 
  AUR62003245-RA  82 FFKIM--LGDFEN-YLRIPRKFKDEYREK--LSQRVTLRGPSGDSWTAAL--AQRGEDIELRNGWRDFVKDHSLEEGDFLVFQHVESSLF--NVL 167
                     55666..555555.5********999755..8889***************..99999999***********************9987777..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+k
  AUR62003245-RA 168 IFDK 171
                     9997 PP
2B3469.8e-152353051690
                     EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
              B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                      ++p++fa+++  +  es++++l+   ++ W+v l  +++  +++l kGW +Fv +n+L++ D +v++l ++ +++
  AUR62003245-RA 235 HTIPREFADNCL-P-MESQEIKLRV-GSKIWRVSL--NRRNVQCTLNKGWAHFVLDNNLETEDYCVLELADTgTSQ 305
                     49******8884.2.3566899877.78*******..999999*************************88654444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MKIEKIVNLK EFLWIAYELK IGFNGILWVN DSVIVQEEKS VLSSWLQRFR VFVTEMTDVC  60
AQCKTWRKKQ YWNEFPDNKH HFFKIMLGDF ENYLRIPRKF KDEYREKLSQ RVTLRGPSGD  120
SWTAALAQRG EDIELRNGWR DFVKDHSLEE GDFLVFQHVE SSLFNVLIFD KTGCEREDSH  180
FVIQGKGTKS RTGKGKCYES NRRPLTKKDK ERAFRLASKH STTRPSCKIR MKQSHTIPRE  240
FADNCLPMES QEIKLRVGSK IWRVSLNRRN VQCTLNKGWA HFVLDNNLET EDYCVLELAD  300
TGTSQQPLTL DVHIYRAVEK IVPLKVILP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-34B3 family protein