PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003248-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 204aa    MW: 22954.4 Da    PI: 9.2982
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003248-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.43.9e-16991965100
                     -..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   5 ltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy.rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      ++ ++l+++++ +p + +++h  gg+    ++++l+  +  ++W+vk+++ r +sg+ + l+kG + F  +n ++ gD++vF+l+++   +l+v
  AUR62003248-RA  99 KITTSYLTHNLVNIPVQWVNAHmeGGD---VREIKLQGpPPRKTWTVKMTVyRPSSGSnCKLSKGLSAFFLDNYVQLGDICVFELVKNAPNTLKV 190
                     45678888999***********86444...247999997888*******6559999989*****************************9999*** PP

                     EEE-SS CS
              B3  95 kvfrks 100
                     ++frk+
  AUR62003248-RA 191 TIFRKN 196
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MGWKEFVKEN DLKVGEFMVF TYLGNSNFSV KLYGTHGCLK ETVQEGEAPA EIELMYKRGK  60
QTRRPGAGRP PSYDPDEELV RVAQAYRSAH SDIPSFMVKI TTSYLTHNLV NIPVQWVNAH  120
MEGGDVREIK LQGPPPRKTW TVKMTVYRPS SGSNCKLSKG LSAFFLDNYV QLGDICVFEL  180
VKNAPNTLKV TIFRKNDVLV FQS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.11e-12B3 family protein