PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003365-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 260aa    MW: 28971.5 Da    PI: 5.9778
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003365-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32.1e-113887154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r++ +  rE+ RRdr+N+ f+eL + l +      +K++Ka+iL+ A++ +++L
  AUR62003365-RA 38 RKVQKADREKLRRDRLNDQFQELGSALDPE----RPKNDKATILTDAIQILRDL 87
                    5677889********************997....69*************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDQWQTDKVC QPLNPSQSSQ FDSRQRPEAE VKDPVAVRKV QKADREKLRR DRLNDQFQEL  60
GSALDPERPK NDKATILTDA IQILRDLTAE VNKLKAECAT LSEESHELTQ EKNELREEKA  120
SLKSDIENLN AQYQQRLRVV YPWGAVESSV VMGPPYSYSL PMAVPPGSIP MHPSLQPYPF  180
FGSQNASTIP SPHPAFMPYP TPPNPHVEQQ PIQPASTSHV LSKPIKGSDS GKARHLERTD  240
DSSDVATELE LKTPGCGQR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-83bHLH family protein