PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003602-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 155aa    MW: 17518.4 Da    PI: 11.8187
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003602-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-084080954
                    HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     r RR+ri +++  L++l+P        K++ a++L +A++Y+k L
  AUR62003602-RA 40 ARHRRERISEKIRILQRLVPGG-----VKMDTASMLDEAIRYVKFL 80
                    699*****************96.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MKEMMYRIAV MQPVDIDPAA IRKPKRRNVR ISNDPQSVAA RHRRERISEK IRILQRLVPG  60
GVKMDTASML DEAIRYVKFL KRQIRQLQSG SSNHQPPPVP TLSPSDWPPP PSVSASLFSP  120
YSSPGSSKVV LFRDNNKNVF KNLRLSLILF SSRV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.11e-47bHLH family protein