PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003648-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 245aa MW: 28023.6 Da PI: 9.3186

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003648-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.5	4.8e-32	166	224	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++ +prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ AUR62003648-RA 166 LDDGYKWRKYGQKVVKNTLHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHS 224 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MLNQSLMEDH HQVGLSSSQM GFYLNSTNLT SFSPPLVLNH QQQQSDDLKP LNNFLPSSFG 60 LDHVTCTLTQ ALLSSTKPRQ QEDYLSSSFT NNLPPLFSPQ KPTPNYNLWA AWGEGKEYQL 120 AGSKRGCNGD DPILGVSTVK MKKMKARRKV REPRFCFKTM SDIDVLDDGY KWRKYGQKVV 180 KNTLHPRSYY RCTQDNCRVK KRVERLAEDP RMVITTYEGR HIHSPSNDLD ESQGGQPQLN 240 NFFW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	1e-52	WRKY family protein