PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003654-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 250aa    MW: 27012.9 Da    PI: 9.9687
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003654-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.2e-1376123254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +++h+e+ErrRR+riN  f++Lr++lP++      K +Ka++L ++v+ +++L
  AUR62003654-RA  76 CKSHKEAERRRRKRINGHFATLRSVLPNL-----VKTDKASVLAEVVRRVREL 123
                     789*************************9.....7************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MLVNSMASYY EMGNSSNISY PNTNNFLLRP TIQENTTNNA INHNIIASAT TISPSSMLCS  60
SSKAGLSPEA KALAACKSHK EAERRRRKRI NGHFATLRSV LPNLVKTDKA SVLAEVVRRV  120
RELKKATSEL TGDGHEDYDG CNACLLPGDI DEVSLRRSEN DNTTLIATLC CEDRPELILD  180
LTRALRSVKG KVVKAEMATV GGRTKNVLWV RGVGGGGPEG LLKRALKVVV DKAPSSSGLG  240
HGLRMHRPY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.11e-25bHLH family protein