PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003658-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MIKC_MADS

Protein Properties

Length: 222aa MW: 25332.3 Da PI: 4.4802

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003658-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	50.6	2.4e-16	1	32	20	51
HHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 20 ilKKAeELSvLCdaevaviifsstgklyeyss 51 ++KKAeELS+LCda+va+i+fs tgkl+eyss AUR62003658-RA 1 LFKKAEELSILCDADVALILFSATGKLFEYSS 32 8*****************************96 PP
2	K-box	55.3	2.9e-19	64	144	18	98
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++kL +ei + +++Rh+ Ge+L+ Ls++eLqqLe+ Le +l+++ +kK e ++++i+ l +k el een+ Lr+++ AUR62003658-RA 64 NSDYTKLSDEIAQQSQQLRHMRGEELQGLSIEELQQLEKSLEFGLRHVMDKKGEKIMNEIDLLEQKGSELMEENEWLRQQV 144 56899**************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
LFKKAEELSI LCDADVALIL FSATGKLFEY SSTSMKKILE RQKLHSKNLE KLDQPSLRLQ 60 LVENSDYTKL SDEIAQQSQQ LRHMRGEELQ GLSIEELQQL EKSLEFGLRH VMDKKGEKIM 120 NEIDLLEQKG SELMEENEWL RQQVLEASKG IQQAADSENV IYEEGQSSES VTNGYSSSSG 180 PSQDNDESSD LYLKLGYFVV KFRNLHYHTL ADEENINDHL Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	1e-78	MIKC_MADS family protein