PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003725-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 232aa    MW: 26152.1 Da    PI: 5.0154
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003725-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.97.5e-1172116347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+ E+  ++++  ++G+g Wk+Ia+    ++t+ q+ s+ qky
   AUR62003725-RA  72 PWTKKEHRAFLEGLDMFGKGEWKSIAEIYVPTKTASQVASHGQKY 116
                      7**************************8888**********9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MFENALAELD VTSPDFYEKI MAIMPWKSLE QIKSHYGKLV ADTAMIEQDE TGGFGGDDNG  60
AKVDRKPCRG APWTKKEHRA FLEGLDMFGK GEWKSIAEIY VPTKTASQVA SHGQKYYRRL  120
KCRTPVEKRR SSIHDIRIVN SSIVETAPRQ PTRHSVIQRI PQSDNRNNNN KQDDVVVGQH  180
DSSNADPATA LNSINNINSQ IVVEDSLDDL DYDNLFADYD EIISDYNDIF I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.18e-30MYB family protein