PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003731-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 777aa MW: 90529.2 Da PI: 6.9932

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003731-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.6	4.1e-18	129	231	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y+ +A++vGFs+rk++++++ +++ +t++ +vC+ egkr+ kk ++++ r+ + trt+Ck +l+ k+++dgk++v + + AUR62003731-RA 129 LYSLHASTVGFSIRKHTTRYRLHTRIVTEKYYVCYAEGKRHIAAKKtnmvlmvdednkdlKQRKPRQVSITRTNCKESLRAKMNDDGKFNVVSHV 223 7999***********************************9999999******98888999999********************** PP FAR1 83 leHnHela 90 l+HnHel+ AUR62003731-RA 224 LQHNHELT 231 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 777 aa Download sequence
MPETSKASNY ENLMREFLQL QRDNRPPLTQ HPEKTWSFDL NQTFREGEAE NFVDDLDEFN 60 DDNIQNSKVP EIQIQEDEDQ VIPNTLDEEG QPVDEDEDTN PKPIDTTGLD MEGSLVGVER 120 DTYQEIYDLY SLHASTVGFS IRKHTTRYRL HTRIVTEKYY VCYAEGKRHI AAKKTNMVLM 180 VDEDNKDLKQ RKPRQVSITR TNCKESLRAK MNDDGKFNVV SHVLQHNHEL TRKQWHYLHR 240 SKSEVKIEKA VAIKTMKSAG LSTMDTYNYM CTEANGDENL GHSVVDHLNF CSRLRMEQIE 300 AGDAQTLVNI LIEEQKEDPN FYFRVKFDKE GNEKTDSFVW LLETFKKSME NRIPTSIFTD 360 QDQAMATAIE QVLPDTRHRL CIWHLEQNAI TRFGALKRDN EFKKIFNKCL KGCVTETEFE 420 ERWKEMIQKF DLVNHAWYQR VYNLKEKWCP AFSKDFFSAG ILSSQRSEST NHAVGFRANK 480 STTLTEFYRI FVRTIKRWRS DEKYNEFTCS KSIAFTSLPL SGMLKHAAQV YTLSLFRDFE 540 EEFGYSMATT VQILGRTEEN IILYEVSLEE KPWSSQQVSY IHESQTIWCT CKNFEASGWL 600 CYHCLRILHL HSITRIPEKY ISKRWTKLAK TEVWNRMENK DPKLPYTPWR HTMMRKYYNL 660 ILKSQENEKA RAFMEEKFKN CMKMVEDLLA AEAFTEEVAA SDDNSNVAES SQSTNNTASS 720 STSTTIPTIL DPKRVVTKGR SKRAKGALEK GKKSKQKALP DPNSEFGSKT PTVRLF*

Sequence ? help Back to Top

Protein Sequence Length: 777 aa Download sequence

MPETSKASNY ENLMREFLQL QRDNRPPLTQ HPEKTWSFDL NQTFREGEAE NFVDDLDEFN  60
DDNIQNSKVP EIQIQEDEDQ VIPNTLDEEG QPVDEDEDTN PKPIDTTGLD MEGSLVGVER  120
DTYQEIYDLY SLHASTVGFS IRKHTTRYRL HTRIVTEKYY VCYAEGKRHI AAKKTNMVLM  180
VDEDNKDLKQ RKPRQVSITR TNCKESLRAK MNDDGKFNVV SHVLQHNHEL TRKQWHYLHR  240
SKSEVKIEKA VAIKTMKSAG LSTMDTYNYM CTEANGDENL GHSVVDHLNF CSRLRMEQIE  300
AGDAQTLVNI LIEEQKEDPN FYFRVKFDKE GNEKTDSFVW LLETFKKSME NRIPTSIFTD  360
QDQAMATAIE QVLPDTRHRL CIWHLEQNAI TRFGALKRDN EFKKIFNKCL KGCVTETEFE  420
ERWKEMIQKF DLVNHAWYQR VYNLKEKWCP AFSKDFFSAG ILSSQRSEST NHAVGFRANK  480
STTLTEFYRI FVRTIKRWRS DEKYNEFTCS KSIAFTSLPL SGMLKHAAQV YTLSLFRDFE  540
EEFGYSMATT VQILGRTEEN IILYEVSLEE KPWSSQQVSY IHESQTIWCT CKNFEASGWL  600
CYHCLRILHL HSITRIPEKY ISKRWTKLAK TEVWNRMENK DPKLPYTPWR HTMMRKYYNL  660
ILKSQENEKA RAFMEEKFKN CMKMVEDLLA AEAFTEEVAA SDDNSNVAES SQSTNNTASS  720
STSTTIPTIL DPKRVVTKGR SKRAKGALEK GKKSKQKALP DPNSEFGSKT PTVRLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-56	FAR1 family protein